Maize Inflorescence
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Gene Cluster

 Information

Given a gene or list of genes, this looksup for cluster information. All genes in a given cluster are co-expressed.

 Gene clusters

  • The co-expressed gene clusters are based on Andrea's results
  • Further details can be found in Dr. Andrea Eveland’s paper

 Instructions

Steps to follow

  • Provide a gene id in the box labeled Search using a single gene id. and click Search
  • Output:
    - Cluster number the gene belongs to
    - Count of other genes in this list
    - Tabular list of all the genes in this cluster, with gene descriptions
  • Alternatively, if you have a saved gene list, a dropdown menu is provided with the filename. Select a file and click on Classify into clusters
  • Output
    - Tabular format of cluster, gene id and gene description is displayed
    - Genes that are not included in any cluster is listed below the table
  • The expression profiles of these genes can be accessed by selecting genes of interest and click on Profile display

Search using a single gene ID